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vastorbit.machine_learning.vast.ensemble.RandomForestRegressor

class vastorbit.machine_learning.vast.ensemble.RandomForestRegressor(name: str = None, overwrite_model: bool = False, **kwargs)

Creates an RandomForestRegressor object using scikit-learn for training and the scalability of VAST DataBase for the inferences.

Parameters:
  • name (str, optional) – Name of the model. The model is stored in the database.

  • overwrite_model (bool, optional) – If set to True, training a model with the same name as an existing model overwrites the existing model.

  • **kwargs (scikit-learn model parameters.)

Variables:
  • created (Many attributes are)

  • phase. (during the fitting)

  • trees_ (list of BinaryTreeRegressor) – Tree models are instances of ` BinaryTreeRegressor, each possessing various attributes. For more detailed information, refer to the documentation for BinaryTreeRegressor.

  • feature_importances_ (numpy.array) – The importance of features. It is calculated using the MDI (Mean Decreased Impurity). To determine the final score, vastorbit sums the scores of each tree, normalizes them and applies an activation function to scale them. It is necessary to use the features_importance() method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.

  • feature_importances_trees_ (dict of numpy.array) – Each element of the array represents the feature importance of tree i. The importance of features is calculated using the MDI (Mean Decreased Impurity). It is necessary to use the features_importance() method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.

  • n_estimators_ (int) – The number of model estimators.

  • note:: (..) – All attributes can be accessed using the get_attributes() method.

Examples

The following examples provide a basic understanding of usage. For more detailed examples, please refer to the Machine Learning or the Examples section on the website.

Important

Many tree-based models inherit from the RandomForest base class, and it’s recommended to use it directly for access to a wider range of options.

Load data for machine learning

We import vastorbit:

import vastorbit as vo

Hint

By assigning an alias to vastorbit, we mitigate the risk of code collisions with other libraries. This precaution is necessary because vastorbit uses commonly known function names like “average” and “median”, which can potentially lead to naming conflicts. The use of an alias ensures that the functions from vastorbit are used as intended without interfering with functions from other libraries.

For this example, we will use the winequality dataset.

import vastorbit.datasets as vod

data = vod.load_winequality()
123
fixed_acidity
Decimal(6, 3)
123
volatile_acidity
Decimal(7, 4)
123
citric_acid
Decimal(6, 3)
123
residual_sugar
Decimal(7, 3)
123
chlorides
Double
123
free_sulfur_dioxide
Decimal(7, 2)
123
total_sulfur_dioxide
Decimal(7, 2)
123
density
Double
123
ph
Decimal(6, 3)
123
sulphates
Decimal(6, 3)
123
alcohol
Double
123
quality
Integer
123
good
Integer
Abc
color
Varchar(20)
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Rows: 1-100 | Columns: 14

Note

vastorbit offers a wide range of sample datasets that are ideal for training and testing purposes. You can explore the full list of available datasets in the Datasets, which provides detailed information on each dataset and how to use them effectively. These datasets are invaluable resources for honing your data analysis and machine learning skills within the vastorbit environment.

You can easily divide your dataset into training and testing subsets using the VastFrame.train_test_split() method. This is a crucial step when preparing your data for machine learning, as it allows you to evaluate the performance of your models accurately.

data = vod.load_winequality()
train, test = data.train_test_split(test_size = 0.2)

Warning

In this case, vastorbit utilizes seeded randomization to guarantee the reproducibility of your data split. However, please be aware that this approach may lead to reduced performance. For a more efficient data split, you can use the VastFrame.to_db() method to save your results into tables or temporary tables. This will help enhance the overall performance of the process.

Model Initialization

First we import the RandomForestRegressor model:

from vastorbit.machine_learning.vast import RandomForestRegressor

Then we can create the model:

model = RandomForestRegressor(
    n_estimators = 5,
    max_depth = 3,
)

Important

The model name is crucial for the model management system and versioning. It’s highly recommended to provide a name if you plan to reuse the model later.

Model Training

We can now fit the model:

model.fit(
    train,
    [
        "fixed_acidity",
        "volatile_acidity",
        "citric_acid",
        "residual_sugar",
        "chlorides",
        "density",
    ],
    "quality",
    test,
)

Important

To train a model, you can directly use the VastFrame or the name of the relation stored in the database. The test set is optional and is only used to compute the test metrics. In vastorbit, we don’t work using X matrices and y vectors. Instead, we work directly with lists of predictors and the response name.

Features Importance

We can conveniently get the features importance:

result = model.features_importance()

Note

In models such as RandomForest, feature importance is calculated using the MDI (Mean Decreased Impurity). To determine the final score, vastorbit sums the scores of each tree, normalizes them and applies an activation function to scale them.

Metrics

We can get the entire report using:

model.report()
value
explained_variance0.22215877978638876
max_error3.518543510025551
median_absolute_error0.5504433
mean_absolute_error0.6437507500709101
mean_squared_error0.5896723348051176
root_mean_squared_error0.8085613377830784
r20.2221453323574475
r2_adj0.21862562797897434
aic-689.9164614690346
bic-653.7086407938214
Rows: 1-10 | Columns: 2

Important

Most metrics are computed using a single SQL query, but some of them might require multiple SQL queries. Selecting only the necessary metrics in the report can help optimize performance. E.g. model.report(metrics = ["mse", "r2"]).

You can utilize the score() function to calculate various regression metrics, with the R-squared being the default.

model.score()

Prediction

Prediction is straight-forward:

model.predict(
    test,
    [
        "fixed_acidity",
        "volatile_acidity",
        "citric_acid",
        "residual_sugar",
        "chlorides",
        "density",
    ],
    "prediction",
)
123
fixed_acidity
Decimal(6, 3)
123
volatile_acidity
Decimal(7, 4)
123
citric_acid
Decimal(6, 3)
123
residual_sugar
Decimal(7, 3)
123
chlorides
Double
123
free_sulfur_dioxide
Decimal(7, 2)
123
total_sulfur_dioxide
Decimal(7, 2)
123
density
Double
123
ph
Decimal(6, 3)
123
sulphates
Decimal(6, 3)
123
alcohol
Double
123
quality
Integer
123
good
Integer
Abc
color
Varchar(20)
123
seedrand
Decimal(26, 6)
123
prediction
Decimal(32, 27)
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777.10.220.742.70.04442.0144.00.9913.310.4112.260white0.026.518543510025551
786.90.190.496.60.03649.0172.00.99323.20.2711.560white0.155.947366083076601
796.50.240.241.60.04615.060.00.99283.190.399.850white0.165.594640869987308
807.20.40.491.10.04811.0138.00.99293.010.429.350white0.075.649018374113556
817.80.210.491.350.0526.048.00.99113.150.2811.450white0.165.958767891756503
826.90.250.243.60.05713.085.00.99422.990.489.540white0.135.594640869987308
837.20.080.491.30.0518.0148.00.99453.460.4410.260white0.095.947366083076601
847.20.080.491.30.0518.0148.00.99453.460.4410.260white0.015.947366083076601
856.20.150.490.90.03317.051.00.99323.30.79.460white0.135.947366083076601
866.70.250.7419.40.05444.0169.01.00043.510.459.860white0.145.649018374113556
876.80.270.491.20.04435.0126.00.993.130.4812.171white0.16.258868293398618
889.20.180.491.50.04139.0130.00.99453.040.499.871white0.115.947366083076601
898.80.230.743.20.04215.0126.00.99343.020.5111.260white0.145.649018374113556
906.60.30.241.20.03417.0121.00.99333.130.369.250white0.075.594640869987308
917.90.280.497.70.04548.0195.00.99543.040.5511.060white0.125.649018374113556
927.20.270.7412.50.03747.0156.00.99813.040.448.750white0.25.649018374113556
937.30.260.495.00.02832.0107.00.99363.240.5410.860white0.085.649018374113556
947.10.180.7415.60.04444.0176.00.99963.380.679.060white0.056.3475380891638435
957.10.180.7415.60.04444.0176.00.99963.380.679.060white0.126.3475380891638435
968.90.130.491.00.0286.024.00.99262.910.329.950white0.15.9410343528806475
977.90.120.495.20.04933.0152.00.99523.180.4710.660white0.05.947366083076601
986.70.290.494.70.03435.0156.00.99453.130.459.960white0.145.649018374113556
996.70.30.494.80.03436.0158.00.99453.120.459.960white0.195.649018374113556
1008.50.150.491.50.03117.0122.00.99323.030.410.360white0.135.947366083076601
Rows: 1-100 | Columns: 16

Note

Predictions can be made automatically using the test set, in which case you don’t need to specify the predictors. Alternatively, you can pass only the VastFrame to the predict() function, but in this case, it’s essential that the column names of the VastFrame match the predictors and response name in the model.

Plots

Tree models can be visualized by drawing their tree plots. For more examples, check out Machine Learning - Tree Plots.

model.plot_tree()
../_images/machine_learning_VAST_rfreg.png

Note

The above example may not render properly in the doc because of the huge size of the tree. But it should render nicely in jupyter environment.

In order to plot graph using graphviz separately, you can extract the graphviz DOT file code as follows:

model.to_graphviz()

This string can then be copied into a DOT file which can beparsed by graphviz.

Contour plot is another useful plot that can be produced for models with two predictors.

model.contour()

Important

Machine learning models with two predictors can usually benefit from their own contour plot. This visual representation aids in exploring predictions and gaining a deeper understanding of how these models perform in different scenarios. Please refer to Contour Plot for more examples.Model Exporting


To Memmodel

model.to_memmodel()

Note

MemModel objects serve as in-memory representations of machine learning models. They can be used for both in-database and in-memory prediction tasks. These objects can be pickled in the same way that you would pickle a scikit-learn model.

The following methods for exporting the model use MemModel, and it is recommended to use MemModel directly.

To SQL

You can get the SQL code by:

model.to_sql()

To Python

To obtain the prediction function in Python syntax, use the following code:

X = [[4.2, 0.17, 0.36, 1.8, 0.029, 0.9899]]
model.to_python()(X)

Hint

The to_python() method is used to retrieve predictions, probabilities, or cluster distances. For specific details on how to use this method for different model types, refer to the relevant documentation for each model.

__init__(name: str = None, overwrite_model: bool = False, **kwargs) None

Methods

__init__([name, overwrite_model])

contour([nbins, chart])

Draws the model's contour plot.

deploySQL([X])

Returns the SQL code needed to deploy the model.

drop()

Drops the model from the VAST DataBase.

export_models(name, path[, kind])

Exports machine learning models.

features_importance([tree_id, show, chart])

Computes the model's features importance.

fit(input_relation, X, y[, test_relation, ...])

Trains the model.

get_attributes([attr_name])

Returns the model attributes.

get_match_index(x, col_list[, str_check])

Returns the matching index.

get_params()

Returns the parameters of the model.

get_plotting_lib([class_name, chart, ...])

Returns the first available library (Plotly, Matplotlib) to draw a specific graphic.

get_tree([tree_id])

Returns a table with all the input tree information.

import_models(path[, schema, kind])

Imports machine learning models.

plot([max_nb_points, chart])

Draws the model.

plot_tree([tree_id, pic_path])

Draws the input tree.

predict(vdf[, X, name, inplace])

Predicts using the input relation.

regression_report([metrics])

Computes a regression report using multiple metrics to evaluate the model (r2, mse, max error...).

report([metrics])

Computes a regression report using multiple metrics to evaluate the model (r2, mse, max error...).

score([metric])

Computes the model score.

set_params([parameters])

Sets the parameters of the model.

summarize()

Summarizes the model.

to_binary(path)

Exports the model to the VAST Binary format.

to_graphviz([tree_id, classes_color, ...])

Returns the code for a Graphviz tree.

to_memmodel()

Converts the model to an InMemory object that can be used for different types of predictions.

to_python([return_proba, ...])

Returns the Python function needed for in-memory scoring without using built-in VAST functions.

to_sql([X, return_proba, ...])

Returns the SQL code needed to deploy the model without using built-in VAST functions.

Attributes