vastorbit.machine_learning.vast.cluster.BisectingKMeans¶
- class vastorbit.machine_learning.vast.cluster.BisectingKMeans(name: str = None, overwrite_model: bool = False, **kwargs)¶
Creates a BisectingKMeans object using the VAST bisecting k-means algorithm. k-means clustering is a method of vector quantization, originally from signal processing, that aims to partition n observations into k clusters. Each observation belongs to the cluster with the nearest mean (cluster centers or cluster centroid), which serves as a prototype of the cluster. This results in a partitioning of the data space into Voronoi cells. Bisecting k-means combines k-means and hierarchical clustering.
- Parameters:
name (str, optional) – Name of the model. The model is stored in the database.
overwrite_model (bool, optional) – If set to
True, training a model with the same name as an existing model overwrites the existing model.**kwargs (
scikit-learnmodel parameters.)
- Variables:
created (Many attributes are)
phase. (during the fitting)
feature_names_in_ (cluster_centers_, labels_, inertia_, n_features_in_,)
note:: (..) – All attributes can be accessed using the
get_attributes()method.
Examples
The following examples provide a basic understanding of usage. For more detailed examples, please refer to the Machine Learning or the Examples section on the website.
Load data for machine learning¶
We import
vastorbit:import vastorbit as vo
Hint
By assigning an alias to
vastorbit, we mitigate the risk of code collisions with other libraries. This precaution is necessary because vastorbit uses commonly known function names like “average” and “median”, which can potentially lead to naming conflicts. The use of an alias ensures that the functions fromvastorbitare used as intended without interfering with functions from other libraries.For this example, we will use the winequality dataset.
import vastorbit.datasets as vod data = vod.load_winequality()
123fixed_acidityDecimal(6, 3)123volatile_acidityDecimal(7, 4)123citric_acidDecimal(6, 3)123residual_sugarDecimal(7, 3)123chloridesDouble123free_sulfur_dioxideDecimal(7, 2)123total_sulfur_dioxideDecimal(7, 2)123densityDouble123phDecimal(6, 3)123sulphatesDecimal(6, 3)123alcoholDouble123qualityInteger123goodIntegerAbccolorVarchar(20)1 6.3 0.67 0.48 12.6 0.052 57.0 222.0 0.9979 3.17 0.52 9.3 6 0 white 2 7.4 0.4 0.29 5.4 0.044 31.0 122.0 0.994 3.3 0.5 11.1 8 1 white 3 7.1 0.26 0.31 2.2 0.044 29.0 128.0 0.9937 3.34 0.64 10.9 8 1 white 4 9.0 0.31 0.48 6.6 0.043 11.0 73.0 0.9938 2.9 0.38 11.6 5 0 white 5 6.3 0.39 0.24 6.9 0.069 9.0 117.0 0.9942 3.15 0.35 10.2 4 0 white 6 8.2 0.22 0.36 6.8 0.034 12.0 90.0 0.9944 3.01 0.38 10.5 8 1 white 7 7.1 0.19 0.28 3.6 0.033 16.0 78.0 0.993 2.91 0.78 11.4 6 0 white 8 7.3 0.25 0.36 13.1 0.05 35.0 200.0 0.9986 3.04 0.46 8.9 7 1 white 9 7.9 0.2 0.34 1.2 0.04 29.0 118.0 0.9932 3.14 0.41 10.6 6 0 white 10 7.1 0.26 0.32 5.9 0.037 39.0 97.0 0.9934 3.31 0.4 11.6 6 0 white 11 7.0 0.2 0.34 5.7 0.035 32.0 83.0 0.9928 3.19 0.46 11.5 6 0 white 12 6.9 0.3 0.33 4.1 0.035 26.0 155.0 0.9925 3.25 0.79 12.3 8 1 white 13 8.1 0.29 0.49 7.1 0.042 22.0 124.0 0.9944 3.14 0.41 10.8 6 0 white 14 5.8 0.17 0.3 1.4 0.037 55.0 130.0 0.9909 3.29 0.38 11.3 6 0 white 15 5.9 0.415 0.02 0.8 0.038 22.0 63.0 0.9932 3.36 0.36 9.3 5 0 white 16 6.6 0.23 0.26 1.3 0.045 16.0 128.0 0.9934 3.36 0.6 10.0 6 0 white 17 8.6 0.55 0.35 15.55 0.057 35.5 366.5 1.0001 3.04 0.63 11.0 3 0 white 18 6.9 0.35 0.74 1.0 0.044 18.0 132.0 0.992 3.13 0.55 10.2 5 0 white 19 7.6 0.14 0.74 1.6 0.04 27.0 103.0 0.9916 3.07 0.4 10.8 7 1 white 20 9.2 0.28 0.49 11.8 0.042 29.0 137.0 0.998 3.1 0.34 10.1 4 0 white 21 6.2 0.18 0.49 4.5 0.047 17.0 90.0 0.9919 3.27 0.37 11.6 6 0 white 22 5.3 0.165 0.24 1.1 0.051 25.0 105.0 0.9925 3.32 0.47 9.1 5 0 white 23 9.8 0.25 0.74 10.0 0.056 36.0 225.0 0.9977 3.06 0.43 10.0 4 0 white 24 8.1 0.29 0.49 7.1 0.042 22.0 124.0 0.9944 3.14 0.41 10.8 6 0 white 25 6.8 0.22 0.49 0.9 0.052 26.0 128.0 0.991 3.25 0.35 11.4 6 0 white 26 7.2 0.22 0.49 1.0 0.045 34.0 140.0 0.99 3.05 0.34 12.7 6 0 white 27 7.4 0.25 0.49 1.1 0.042 35.0 156.0 0.9917 3.13 0.55 11.3 5 0 white 28 8.2 0.18 0.49 1.1 0.033 28.0 81.0 0.9923 3.0 0.68 10.4 7 1 white 29 6.1 0.22 0.49 1.5 0.051 18.0 87.0 0.9928 3.3 0.46 9.6 5 0 white 30 7.0 0.39 0.24 1.0 0.048 8.0 119.0 0.9923 3.0 0.31 10.1 4 0 white 31 6.1 0.22 0.49 1.5 0.051 18.0 87.0 0.9928 3.3 0.46 9.6 5 0 white 32 6.5 0.36 0.49 2.9 0.03 16.0 94.0 0.9902 3.1 0.49 12.1 7 1 white 33 7.1 0.29 0.49 1.2 0.031 32.0 99.0 0.9893 3.07 0.33 12.2 6 0 white 34 7.4 0.25 0.49 1.1 0.042 35.0 156.0 0.9917 3.13 0.55 11.3 5 0 white 35 6.9 0.23 0.24 14.2 0.053 19.0 94.0 0.9982 3.17 0.5 9.6 5 0 white 36 8.5 0.56 0.74 17.85 0.051 51.0 243.0 1.0005 2.99 0.7 9.2 5 0 white 37 8.2 0.18 0.49 1.1 0.033 28.0 81.0 0.9923 3.0 0.68 10.4 7 1 white 38 6.3 0.23 0.49 7.1 0.05 67.0 210.0 0.9951 3.23 0.34 9.5 5 0 white 39 6.1 0.25 0.49 7.6 0.052 67.0 226.0 0.9956 3.16 0.47 8.9 5 0 white 40 7.2 0.26 0.74 13.6 0.05 56.0 162.0 0.998 3.03 0.44 8.8 5 0 white 41 7.2 0.31 0.24 1.4 0.057 17.0 117.0 0.9928 3.16 0.35 10.5 5 0 white 42 8.0 0.25 0.49 1.2 0.061 27.0 117.0 0.9938 3.08 0.34 9.4 5 0 white 43 7.0 0.18 0.49 5.3 0.04 34.0 125.0 0.9914 3.24 0.4 12.2 6 0 white 44 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 45 8.3 0.2 0.74 4.45 0.044 33.0 130.0 0.9924 3.25 0.42 12.2 6 0 white 46 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 47 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 48 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 49 6.9 0.19 0.49 6.6 0.036 49.0 172.0 0.9932 3.2 0.27 11.5 6 0 white 50 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 51 7.2 0.4 0.49 1.1 0.048 11.0 138.0 0.9929 3.01 0.42 9.3 5 0 white 52 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 53 7.6 0.52 0.49 14.0 0.034 37.0 156.0 0.9958 3.14 0.38 11.8 7 1 white 54 8.3 0.21 0.49 19.8 0.054 50.0 231.0 1.0012 2.99 0.54 9.2 5 0 white 55 6.9 0.34 0.74 11.2 0.069 44.0 150.0 0.9968 3.0 0.81 9.2 5 0 white 56 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 57 8.3 0.2 0.74 4.45 0.044 33.0 130.0 0.9924 3.25 0.42 12.2 6 0 white 58 7.1 0.22 0.74 2.7 0.044 42.0 144.0 0.991 3.31 0.41 12.2 6 0 white 59 7.9 0.11 0.49 4.5 0.048 27.0 133.0 0.9946 3.24 0.42 10.6 6 0 white 60 8.5 0.17 0.74 3.6 0.05 29.0 128.0 0.9928 3.28 0.4 12.4 6 0 white 61 6.4 0.145 0.49 5.4 0.048 54.0 164.0 0.9946 3.56 0.44 10.8 6 0 white 62 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 63 8.3 0.19 0.49 1.2 0.051 11.0 137.0 0.9918 3.06 0.46 11.0 6 0 white 64 8.0 0.44 0.49 9.1 0.031 46.0 151.0 0.9926 3.16 0.27 12.7 8 1 white 65 7.0 0.2 0.74 0.8 0.044 19.0 163.0 0.9931 3.46 0.53 10.2 5 0 white 66 6.9 0.19 0.49 6.6 0.036 49.0 172.0 0.9932 3.2 0.27 11.5 6 0 white 67 7.1 0.25 0.49 3.0 0.03 30.0 96.0 0.9903 3.13 0.39 12.3 7 1 white 68 6.5 0.24 0.24 1.6 0.046 15.0 60.0 0.9928 3.19 0.39 9.8 5 0 white 69 7.2 0.4 0.49 1.1 0.048 11.0 138.0 0.9929 3.01 0.42 9.3 5 0 white 70 7.6 0.52 0.49 14.0 0.034 37.0 156.0 0.9958 3.14 0.38 11.8 7 1 white 71 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 72 7.8 0.21 0.49 1.35 0.052 6.0 48.0 0.9911 3.15 0.28 11.4 5 0 white 73 7.0 0.2 0.49 5.9 0.038 39.0 128.0 0.9938 3.21 0.48 10.8 6 0 white 74 6.9 0.25 0.24 3.6 0.057 13.0 85.0 0.9942 2.99 0.48 9.5 4 0 white 75 7.2 0.08 0.49 1.3 0.05 18.0 148.0 0.9945 3.46 0.44 10.2 6 0 white 76 7.1 0.85 0.49 8.7 0.028 40.0 184.0 0.9962 3.22 0.36 10.7 5 0 white 77 7.6 0.51 0.24 1.2 0.04 10.0 104.0 0.992 3.05 0.29 10.8 6 0 white 78 7.9 0.22 0.24 4.6 0.044 39.0 159.0 0.9927 2.99 0.28 11.5 6 0 white 79 7.7 0.16 0.49 2.0 0.056 20.0 124.0 0.9948 3.32 0.49 10.7 6 0 white 80 7.2 0.08 0.49 1.3 0.05 18.0 148.0 0.9945 3.46 0.44 10.2 6 0 white 81 6.6 0.25 0.24 1.7 0.048 26.0 124.0 0.9942 3.37 0.6 10.1 6 0 white 82 6.7 0.16 0.49 2.4 0.046 57.0 187.0 0.9952 3.62 0.81 10.4 6 0 white 83 6.9 0.25 0.24 3.6 0.057 13.0 85.0 0.9942 2.99 0.48 9.5 4 0 white 84 7.5 0.32 0.24 4.6 0.053 8.0 134.0 0.9958 3.14 0.5 9.1 3 0 white 85 7.4 0.28 0.49 1.5 0.034 20.0 126.0 0.9918 2.98 0.39 10.6 6 0 white 86 6.2 0.15 0.49 0.9 0.033 17.0 51.0 0.9932 3.3 0.7 9.4 6 0 white 87 6.7 0.25 0.74 19.4 0.054 44.0 169.0 1.0004 3.51 0.45 9.8 6 0 white 88 6.5 0.26 0.74 13.3 0.044 68.0 224.0 0.9972 3.18 0.54 9.5 6 0 white 89 7.9 0.16 0.74 17.85 0.037 52.0 187.0 0.9998 2.99 0.41 9.3 5 0 white 90 5.6 0.185 0.49 1.1 0.03 28.0 117.0 0.9918 3.55 0.45 10.3 6 0 white 91 7.5 0.2 0.49 1.3 0.031 8.0 97.0 0.9918 3.06 0.62 11.1 5 0 white 92 8.0 0.3 0.49 9.4 0.046 47.0 188.0 0.9964 3.14 0.48 10.0 5 0 white 93 8.0 0.34 0.49 9.0 0.033 39.0 180.0 0.9936 3.13 0.38 12.3 8 1 white 94 7.7 0.35 0.49 8.65 0.033 42.0 186.0 0.9931 3.14 0.38 12.4 8 1 white 95 7.6 0.29 0.49 9.6 0.03 45.0 197.0 0.9938 3.13 0.38 12.3 7 1 white 96 6.7 0.62 0.24 1.1 0.039 6.0 62.0 0.9934 3.41 0.32 10.4 5 0 white 97 6.8 0.27 0.49 1.2 0.044 35.0 126.0 0.99 3.13 0.48 12.1 7 1 white 98 7.7 0.27 0.49 1.8 0.041 23.0 86.0 0.9914 3.16 0.42 12.5 6 0 white 99 6.7 0.51 0.24 2.1 0.043 14.0 155.0 0.9904 3.22 0.6 13.0 6 0 white 100 7.4 0.19 0.49 9.3 0.03 26.0 132.0 0.994 2.99 0.32 11.0 7 1 white Rows: 1-100 | Columns: 14Note
vastorbit offers a wide range of sample datasets that are ideal for training and testing purposes. You can explore the full list of available datasets in the Datasets, which provides detailed information on each dataset and how to use them effectively. These datasets are invaluable resources for honing your data analysis and machine learning skills within the vastorbit environment.
Model Initialization¶
First we import the
BisectingKMeansmodel:from vastorbit.machine_learning.vast import BisectingKMeans
Then we can create the model:
model = BisectingKMeans( n_clusters = 8, algorithm = 'lloyd', bisecting_strategy = "biggest_inertia", max_iter = 300, tol = 1e-4, )
Important
The model name is crucial for the model management system and versioning. It’s highly recommended to provide a name if you plan to reuse the model later.
Model Training¶
We can now fit the model:
model.fit(data, X = ["density", "sulphates"])
Important
To train a model, you can directly use the
VastFrameor the name of the relation stored in the database. The test set is optional and is only used to compute the test metrics. Invastorbit, we don’t work usingXmatrices andyvectors. Instead, we work directly with lists of predictors and the response name.Hint
For clustering and anomaly detection, the use of predictors is optional. In such cases, all available predictors are considered, which can include solely numerical variables or a combination of numerical and categorical variables, depending on the model’s capabilities.
Metrics¶
You can also find the cluster positions by:
model.clusters_
In order to get the size of each cluster, you can use:
model.cluster_size_
To evaluate the model, various attributes are computed, such as the between sum of squares, the total within clusters sum of squares, and the total sum of squares.
model.between_clusters_ss_ model.total_within_clusters_ss_ model.total_ss_
You also have access to the sum of squares of each cluster.
model.cluster_i_ss_
Some other useful attributes can be used to evaluate the model, like the Elbow Score (the bigger it is, the better it is).
model.elbow_score_
Prediction¶
Predicting or ranking the dataset is straight-forward:
model.predict(data, ["density", "sulphates"])
123fixed_acidityDecimal(6, 3)123volatile_acidityDecimal(7, 4)123citric_acidDecimal(6, 3)123residual_sugarDecimal(7, 3)123chloridesDouble123free_sulfur_dioxideDecimal(7, 2)123total_sulfur_dioxideDecimal(7, 2)123densityDouble123phDecimal(6, 3)123sulphatesDecimal(6, 3)123alcoholDouble123qualityInteger123goodIntegerAbccolorVarchar(20)123BisectingKMeans_defaultvastorbittmpbisectingkmeansmemoryadmin9921f18e754811f1becdea8c65480234Integer1 6.3 0.67 0.48 12.6 0.052 57.0 222.0 0.9979 3.17 0.52 9.3 6 0 white 6 2 7.4 0.4 0.29 5.4 0.044 31.0 122.0 0.994 3.3 0.5 11.1 8 1 white 6 3 7.1 0.26 0.31 2.2 0.044 29.0 128.0 0.9937 3.34 0.64 10.9 8 1 white 6 4 9.0 0.31 0.48 6.6 0.043 11.0 73.0 0.9938 2.9 0.38 11.6 5 0 white 6 5 6.3 0.39 0.24 6.9 0.069 9.0 117.0 0.9942 3.15 0.35 10.2 4 0 white 6 6 8.2 0.22 0.36 6.8 0.034 12.0 90.0 0.9944 3.01 0.38 10.5 8 1 white 6 7 7.1 0.19 0.28 3.6 0.033 16.0 78.0 0.993 2.91 0.78 11.4 6 0 white 6 8 7.3 0.25 0.36 13.1 0.05 35.0 200.0 0.9986 3.04 0.46 8.9 7 1 white 6 9 7.9 0.2 0.34 1.2 0.04 29.0 118.0 0.9932 3.14 0.41 10.6 6 0 white 6 10 7.1 0.26 0.32 5.9 0.037 39.0 97.0 0.9934 3.31 0.4 11.6 6 0 white 6 11 7.0 0.2 0.34 5.7 0.035 32.0 83.0 0.9928 3.19 0.46 11.5 6 0 white 6 12 6.9 0.3 0.33 4.1 0.035 26.0 155.0 0.9925 3.25 0.79 12.3 8 1 white 6 13 8.1 0.29 0.49 7.1 0.042 22.0 124.0 0.9944 3.14 0.41 10.8 6 0 white 6 14 5.8 0.17 0.3 1.4 0.037 55.0 130.0 0.9909 3.29 0.38 11.3 6 0 white 6 15 5.9 0.415 0.02 0.8 0.038 22.0 63.0 0.9932 3.36 0.36 9.3 5 0 white 6 16 6.6 0.23 0.26 1.3 0.045 16.0 128.0 0.9934 3.36 0.6 10.0 6 0 white 6 17 8.6 0.55 0.35 15.55 0.057 35.5 366.5 1.0001 3.04 0.63 11.0 3 0 white 6 18 6.9 0.35 0.74 1.0 0.044 18.0 132.0 0.992 3.13 0.55 10.2 5 0 white 6 19 7.6 0.14 0.74 1.6 0.04 27.0 103.0 0.9916 3.07 0.4 10.8 7 1 white 6 20 9.2 0.28 0.49 11.8 0.042 29.0 137.0 0.998 3.1 0.34 10.1 4 0 white 6 21 6.2 0.18 0.49 4.5 0.047 17.0 90.0 0.9919 3.27 0.37 11.6 6 0 white 6 22 5.3 0.165 0.24 1.1 0.051 25.0 105.0 0.9925 3.32 0.47 9.1 5 0 white 6 23 9.8 0.25 0.74 10.0 0.056 36.0 225.0 0.9977 3.06 0.43 10.0 4 0 white 6 24 8.1 0.29 0.49 7.1 0.042 22.0 124.0 0.9944 3.14 0.41 10.8 6 0 white 6 25 6.8 0.22 0.49 0.9 0.052 26.0 128.0 0.991 3.25 0.35 11.4 6 0 white 6 26 7.2 0.22 0.49 1.0 0.045 34.0 140.0 0.99 3.05 0.34 12.7 6 0 white 6 27 7.4 0.25 0.49 1.1 0.042 35.0 156.0 0.9917 3.13 0.55 11.3 5 0 white 6 28 8.2 0.18 0.49 1.1 0.033 28.0 81.0 0.9923 3.0 0.68 10.4 7 1 white 6 29 6.1 0.22 0.49 1.5 0.051 18.0 87.0 0.9928 3.3 0.46 9.6 5 0 white 6 30 7.0 0.39 0.24 1.0 0.048 8.0 119.0 0.9923 3.0 0.31 10.1 4 0 white 6 31 6.1 0.22 0.49 1.5 0.051 18.0 87.0 0.9928 3.3 0.46 9.6 5 0 white 6 32 6.5 0.36 0.49 2.9 0.03 16.0 94.0 0.9902 3.1 0.49 12.1 7 1 white 6 33 7.1 0.29 0.49 1.2 0.031 32.0 99.0 0.9893 3.07 0.33 12.2 6 0 white 6 34 7.4 0.25 0.49 1.1 0.042 35.0 156.0 0.9917 3.13 0.55 11.3 5 0 white 6 35 6.9 0.23 0.24 14.2 0.053 19.0 94.0 0.9982 3.17 0.5 9.6 5 0 white 6 36 8.5 0.56 0.74 17.85 0.051 51.0 243.0 1.0005 2.99 0.7 9.2 5 0 white 6 37 8.2 0.18 0.49 1.1 0.033 28.0 81.0 0.9923 3.0 0.68 10.4 7 1 white 6 38 6.3 0.23 0.49 7.1 0.05 67.0 210.0 0.9951 3.23 0.34 9.5 5 0 white 6 39 6.1 0.25 0.49 7.6 0.052 67.0 226.0 0.9956 3.16 0.47 8.9 5 0 white 6 40 7.2 0.26 0.74 13.6 0.05 56.0 162.0 0.998 3.03 0.44 8.8 5 0 white 6 41 7.2 0.31 0.24 1.4 0.057 17.0 117.0 0.9928 3.16 0.35 10.5 5 0 white 6 42 8.0 0.25 0.49 1.2 0.061 27.0 117.0 0.9938 3.08 0.34 9.4 5 0 white 6 43 7.0 0.18 0.49 5.3 0.04 34.0 125.0 0.9914 3.24 0.4 12.2 6 0 white 6 44 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 6 45 8.3 0.2 0.74 4.45 0.044 33.0 130.0 0.9924 3.25 0.42 12.2 6 0 white 6 46 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 6 47 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 6 48 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 6 49 6.9 0.19 0.49 6.6 0.036 49.0 172.0 0.9932 3.2 0.27 11.5 6 0 white 6 50 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 6 51 7.2 0.4 0.49 1.1 0.048 11.0 138.0 0.9929 3.01 0.42 9.3 5 0 white 6 52 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 6 53 7.6 0.52 0.49 14.0 0.034 37.0 156.0 0.9958 3.14 0.38 11.8 7 1 white 6 54 8.3 0.21 0.49 19.8 0.054 50.0 231.0 1.0012 2.99 0.54 9.2 5 0 white 6 55 6.9 0.34 0.74 11.2 0.069 44.0 150.0 0.9968 3.0 0.81 9.2 5 0 white 6 56 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 6 57 8.3 0.2 0.74 4.45 0.044 33.0 130.0 0.9924 3.25 0.42 12.2 6 0 white 6 58 7.1 0.22 0.74 2.7 0.044 42.0 144.0 0.991 3.31 0.41 12.2 6 0 white 6 59 7.9 0.11 0.49 4.5 0.048 27.0 133.0 0.9946 3.24 0.42 10.6 6 0 white 6 60 8.5 0.17 0.74 3.6 0.05 29.0 128.0 0.9928 3.28 0.4 12.4 6 0 white 6 61 6.4 0.145 0.49 5.4 0.048 54.0 164.0 0.9946 3.56 0.44 10.8 6 0 white 6 62 7.4 0.16 0.49 1.2 0.055 18.0 150.0 0.9917 3.23 0.47 11.2 6 0 white 6 63 8.3 0.19 0.49 1.2 0.051 11.0 137.0 0.9918 3.06 0.46 11.0 6 0 white 6 64 8.0 0.44 0.49 9.1 0.031 46.0 151.0 0.9926 3.16 0.27 12.7 8 1 white 6 65 7.0 0.2 0.74 0.8 0.044 19.0 163.0 0.9931 3.46 0.53 10.2 5 0 white 6 66 6.9 0.19 0.49 6.6 0.036 49.0 172.0 0.9932 3.2 0.27 11.5 6 0 white 6 67 7.1 0.25 0.49 3.0 0.03 30.0 96.0 0.9903 3.13 0.39 12.3 7 1 white 6 68 6.5 0.24 0.24 1.6 0.046 15.0 60.0 0.9928 3.19 0.39 9.8 5 0 white 6 69 7.2 0.4 0.49 1.1 0.048 11.0 138.0 0.9929 3.01 0.42 9.3 5 0 white 6 70 7.6 0.52 0.49 14.0 0.034 37.0 156.0 0.9958 3.14 0.38 11.8 7 1 white 6 71 7.8 0.43 0.49 13.0 0.033 37.0 158.0 0.9955 3.14 0.35 11.3 6 0 white 6 72 7.8 0.21 0.49 1.35 0.052 6.0 48.0 0.9911 3.15 0.28 11.4 5 0 white 6 73 7.0 0.2 0.49 5.9 0.038 39.0 128.0 0.9938 3.21 0.48 10.8 6 0 white 6 74 6.9 0.25 0.24 3.6 0.057 13.0 85.0 0.9942 2.99 0.48 9.5 4 0 white 6 75 7.2 0.08 0.49 1.3 0.05 18.0 148.0 0.9945 3.46 0.44 10.2 6 0 white 6 76 7.1 0.85 0.49 8.7 0.028 40.0 184.0 0.9962 3.22 0.36 10.7 5 0 white 6 77 7.6 0.51 0.24 1.2 0.04 10.0 104.0 0.992 3.05 0.29 10.8 6 0 white 6 78 7.9 0.22 0.24 4.6 0.044 39.0 159.0 0.9927 2.99 0.28 11.5 6 0 white 6 79 7.7 0.16 0.49 2.0 0.056 20.0 124.0 0.9948 3.32 0.49 10.7 6 0 white 6 80 7.2 0.08 0.49 1.3 0.05 18.0 148.0 0.9945 3.46 0.44 10.2 6 0 white 6 81 6.6 0.25 0.24 1.7 0.048 26.0 124.0 0.9942 3.37 0.6 10.1 6 0 white 6 82 6.7 0.16 0.49 2.4 0.046 57.0 187.0 0.9952 3.62 0.81 10.4 6 0 white 6 83 6.9 0.25 0.24 3.6 0.057 13.0 85.0 0.9942 2.99 0.48 9.5 4 0 white 6 84 7.5 0.32 0.24 4.6 0.053 8.0 134.0 0.9958 3.14 0.5 9.1 3 0 white 6 85 7.4 0.28 0.49 1.5 0.034 20.0 126.0 0.9918 2.98 0.39 10.6 6 0 white 6 86 6.2 0.15 0.49 0.9 0.033 17.0 51.0 0.9932 3.3 0.7 9.4 6 0 white 6 87 6.7 0.25 0.74 19.4 0.054 44.0 169.0 1.0004 3.51 0.45 9.8 6 0 white 6 88 6.5 0.26 0.74 13.3 0.044 68.0 224.0 0.9972 3.18 0.54 9.5 6 0 white 6 89 7.9 0.16 0.74 17.85 0.037 52.0 187.0 0.9998 2.99 0.41 9.3 5 0 white 6 90 5.6 0.185 0.49 1.1 0.03 28.0 117.0 0.9918 3.55 0.45 10.3 6 0 white 6 91 7.5 0.2 0.49 1.3 0.031 8.0 97.0 0.9918 3.06 0.62 11.1 5 0 white 6 92 8.0 0.3 0.49 9.4 0.046 47.0 188.0 0.9964 3.14 0.48 10.0 5 0 white 6 93 8.0 0.34 0.49 9.0 0.033 39.0 180.0 0.9936 3.13 0.38 12.3 8 1 white 6 94 7.7 0.35 0.49 8.65 0.033 42.0 186.0 0.9931 3.14 0.38 12.4 8 1 white 6 95 7.6 0.29 0.49 9.6 0.03 45.0 197.0 0.9938 3.13 0.38 12.3 7 1 white 6 96 6.7 0.62 0.24 1.1 0.039 6.0 62.0 0.9934 3.41 0.32 10.4 5 0 white 6 97 6.8 0.27 0.49 1.2 0.044 35.0 126.0 0.99 3.13 0.48 12.1 7 1 white 6 98 7.7 0.27 0.49 1.8 0.041 23.0 86.0 0.9914 3.16 0.42 12.5 6 0 white 6 99 6.7 0.51 0.24 2.1 0.043 14.0 155.0 0.9904 3.22 0.6 13.0 6 0 white 6 100 7.4 0.19 0.49 9.3 0.03 26.0 132.0 0.994 2.99 0.32 11.0 7 1 white 6 Rows: 1-100 | Columns: 15As shown above, a new column has been created, containing the bisected clusters.
Plots - Cluster Plot¶
Plots highlighting the different clusters can be easily drawn using:
model.plot()
Plots - Tree¶
Tree models can be visualized by drawing their tree plots. For more examples, check out Machine Learning - Tree Plots.
model.plot_tree()
Note
The above example may not render properly in the doc because of the huge size of the tree. But it should render nicely in jupyter environment.
In order to plot graph using graphviz separately, you can extract the graphviz DOT file code as follows:
model.to_graphviz()
This string can then be copied into a DOT file which can be parsed by graphviz.
Plots - Contour¶
In order to understand the parameter space, we can also look at the contour plots:
model.contour()
Note
Machine learning models with two predictors can usually benefit from their own contour plot. This visual representation aids in exploring predictions and gaining a deeper understanding of how these models perform in different scenarios. Please refer to Contour Plot for more examples.
Parameter Modification¶
In order to see the parameters:
model.get_params()
And to manually change some of the parameters:
model.set_params({'n_clusters': 5})
Model Exporting¶
To Memmodel
model.to_memmodel()
Note
MemModelobjects serve as in-memory representations of machine learning models. They can be used for both in-database and in-memory prediction tasks. These objects can be pickled in the same way that you would pickle ascikit-learnmodel.The preceding methods for exporting the model use
MemModel, and it is recommended to useMemModeldirectly.To SQL
You can get the SQL query equivalent of the GB model by:
model.to_sql()
Note
This SQL query can be directly used in any database.
Deploy SQL
To get the SQL query which uses VAST functions use below:
model.deploySQL()
To Python
To obtain the prediction function in Python syntax, use the following code:
X = [[0.9, 0.5]] model.to_python()(X)
Hint
The
to_python()method is used to retrieve the anomaly score. For specific details on how to use this method for different model types, refer to the relevant documentation for each model.- __init__(name: str = None, overwrite_model: bool = False, **kwargs) None¶
Methods
__init__([name, overwrite_model])contour([nbins, chart])Draws the model's contour plot.
deploySQL([X])Returns the SQL code needed to deploy the model.
drop()Drops the model from the VAST DataBase.
export_models(name, path[, kind])Exports machine learning models.
features_importance([tree_id, show, chart])Computes the model's features importance.
fit(input_relation[, X, return_report])Trains the model.
get_attributes([attr_name])Returns the model attributes.
get_match_index(x, col_list[, str_check])Returns the matching index.
Returns the parameters of the model.
get_plotting_lib([class_name, chart, ...])Returns the first available library (Plotly, Matplotlib) to draw a specific graphic.
get_tree()Returns a table containing information about the BK-tree.
import_models(path[, schema, kind])Imports machine learning models.
plot([max_nb_points, chart])Draws the model.
plot_tree([pic_path])Draws the input tree.
plot_voronoi([max_nb_points, plot_crosses, ...])Draws the Voronoi Graph of the model.
predict(vdf[, X, name, inplace])Makes predictions using the input relation.
set_params([parameters])Sets the parameters of the model.
Summarizes the model.
to_binary(path)Exports the model to the VAST Binary format.
to_graphviz([round_score, percent, ...])Returns the code for a Graphviz tree.
Converts the model to an InMemory object that can be used for different types of predictions.
to_python([return_proba, ...])Returns the Python function needed for in-memory scoring without using built-in VAST functions.
to_sql([X, return_proba, ...])Returns the SQL code needed to deploy the model without using built-in VAST functions.
Attributes